species:   Scscl
pid:       PID1634
parent:    Ssc-milR-110
paralog:   
locus:     NW_001820823.1:535102-535176
matures:   ['UUUGGUCAAUUUGGUCAACUUGG', 'AAUUUGAUCAAUUUGGUCAAUUU']
srr:       SRR12527899
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527899.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527899.cram NW_001820823.1:535102-535176

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

           ************************     ************************           
AUUUGGUCAAUUUGGUCAAUUUGGUCAACUUGGUCAAUUUGGUCAAUUUGAUCAAUUUGGUCAAUUUGGUCAACU
..((((((((.((((((((.((((((((.(((((((...))))))).)))))))).)))))))).))))))))..
----------UUUGGUCAAUUUGGUCAACUUGG------------------------------------------ l=23 a=0 c
--------------------------------------------AAUUUGAUCAAUUUGGUCAAUUU-------- l=23 a=0 c*
---------------------------------UCAAUUUGGUCAAUUUGAUCA--------------------- l=21 a=1 ma
--------------------------------------------AAUUUGAUCAAUUUGGUCAAUUU-------- l=23 a=0 ma*

---------------------------------UCAAUUUGGUCAAUUUGAUCA--------------------- l=21 a=1 (ma)

mb-00010
ax-1011111
ku-01
ss-110111111110
fn-111
